Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05610

Experiment: 36hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO7 MOI 1
1,285,335	-		BPHYT_RS05600	0.82	-2.2
1,285,356	+		BPHYT_RS05600	0.87	+0.6
1,285,357	-		BPHYT_RS05600	0.87	-0.0
1,285,510	+				+0.5
1,285,535	-				+0.5
1,286,097	+				-1.1
1,286,097	+				-3.0
1,286,328	+		BPHYT_RS05610	0.19	+1.9
1,286,328	+		BPHYT_RS05610	0.19	+1.6
1,286,445	+		BPHYT_RS05610	0.28	+1.5
1,286,446	-		BPHYT_RS05610	0.28	+1.3
1,286,457	+		BPHYT_RS05610	0.29	+2.0
1,286,457	+		BPHYT_RS05610	0.29	+1.3
1,286,457	+		BPHYT_RS05610	0.29	+1.2
1,286,484	+		BPHYT_RS05610	0.31	+1.5
1,286,484	+		BPHYT_RS05610	0.31	+1.8
1,286,484	+		BPHYT_RS05610	0.31	+1.4
1,286,484	+		BPHYT_RS05610	0.31	+3.7
1,287,037	-		BPHYT_RS05610	0.74	+1.6
1,287,152	-		BPHYT_RS05610	0.83	+1.7
1,287,152	-		BPHYT_RS05610	0.83	+1.4
1,287,272	+				+1.3
1,287,272	+				+1.3
1,287,273	-				+0.8
1,287,403	-				+0.6
1,287,409	+				+0.9
1,287,410	-				+0.3
1,287,410	-				+0.9
1,287,495	+				-1.4
1,287,607	-				-0.3
1,287,831	-		BPHYT_RS05615	0.54	+4.4
1,287,886	+		BPHYT_RS05615	0.71	-0.5
1,287,886	+		BPHYT_RS05615	0.71	+0.2
1,288,144	+				-0.8
1,288,296	+		BPHYT_RS05620	0.72	+0.1