Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05525

Experiment: 36hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO7 MOI 1
1,267,080	+				-0.9
1,267,163	+				-0.4
1,267,163	+				-0.1
1,267,163	+				+1.5
1,267,163	+				-0.8
1,267,189	-				-0.0
1,267,207	-				-1.2
1,267,220	-				+0.6
1,267,220	-				+0.0
1,267,313	-				+0.1
1,267,320	+				-0.4
1,267,320	+				-1.0
1,267,320	+				-0.6
1,267,321	-				+0.7
1,267,605	-		BPHYT_RS05520	0.41	-0.4
1,267,881	-		BPHYT_RS05520	0.79	+0.3
1,267,881	-		BPHYT_RS05520	0.79	+0.6
1,267,881	-		BPHYT_RS05520	0.79	-1.4
1,268,891	-		BPHYT_RS05525	0.66	-2.2
1,268,919	-		BPHYT_RS05525	0.68	-0.2
1,269,176	+		BPHYT_RS05525	0.88	-0.9
1,269,336	+				+1.4
1,269,336	+				-1.0
1,269,336	+				-0.7
1,269,337	-				-1.8
1,269,337	-				+0.4
1,269,429	-				-0.1
1,269,444	+				-0.8
1,269,444	+				+0.2
1,269,445	-				+0.8
1,269,478	-		BPHYT_RS05530	0.19	+0.2
1,269,509	+		BPHYT_RS05530	0.31	+1.0
1,269,521	+		BPHYT_RS05530	0.35	+1.1
1,269,522	-		BPHYT_RS05530	0.36	+0.6
1,269,624	-		BPHYT_RS05530	0.74	+0.5
1,269,731	-				-0.6
1,269,997	-				-0.0