Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05310

Experiment: 36hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO7 MOI 1
1,222,318	-		BPHYT_RS05305	0.55	+0.4
1,222,983	-				-0.2
1,222,984	+				-1.3
1,223,230	-		BPHYT_RS05310	0.27	-1.4
1,223,348	-		BPHYT_RS05310	0.40	+0.3
1,223,348	-		BPHYT_RS05310	0.40	-0.7
1,223,404	+		BPHYT_RS05310	0.46	-0.7
1,223,692	-		BPHYT_RS05310	0.77	-0.9
1,223,702	+		BPHYT_RS05310	0.79	+0.6
1,223,703	-		BPHYT_RS05310	0.79	-2.2
1,223,703	-		BPHYT_RS05310	0.79	-0.2
1,223,706	-		BPHYT_RS05310	0.79	+0.2
1,223,706	-		BPHYT_RS05310	0.79	+0.5
1,223,788	+		BPHYT_RS05310	0.88	-1.1
1,223,901	+				-0.2
1,223,902	-				+0.6
1,223,938	+				-0.9
1,223,977	+				+0.0
1,224,685	-		BPHYT_RS05315	0.57	-0.7
1,224,766	-		BPHYT_RS05315	0.64	-1.4
1,224,888	+		BPHYT_RS05315	0.75	-0.6