Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04540

Experiment: 36hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO7 MOI 1
1,047,486	+		BPHYT_RS04535	0.60	-1.2
1,047,618	+		BPHYT_RS04535	0.68	+0.6
1,047,619	-		BPHYT_RS04535	0.68	+0.0
1,047,622	+		BPHYT_RS04535	0.68	+0.2
1,047,622	+		BPHYT_RS04535	0.68	-0.6
1,047,623	-		BPHYT_RS04535	0.69	-2.4
1,047,727	+		BPHYT_RS04535	0.75	-0.1
1,047,727	+		BPHYT_RS04535	0.75	+1.9
1,047,727	+		BPHYT_RS04535	0.75	+0.5
1,047,891	-		BPHYT_RS04535	0.84	-0.7
1,048,194	-				+0.0
1,048,194	-				+0.2
1,048,233	-				-0.6
1,048,267	+				-0.5
1,048,699	+				+0.5
1,048,895	-		BPHYT_RS04540	0.14	+1.0
1,049,032	+		BPHYT_RS04540	0.18	+0.1
1,049,269	+				-0.7
1,049,269	+		BPHYT_RS04540	0.24	-1.2
1,049,270	-		BPHYT_RS04540	0.24	-0.7
1,050,089	+		BPHYT_RS04540	0.44	-0.3
1,050,090	-		BPHYT_RS04540	0.44	-0.7
1,050,227	-		BPHYT_RS04540	0.48	-0.5
1,050,239	-		BPHYT_RS04540	0.48	-0.8
1,051,015	+		BPHYT_RS04540	0.67	-1.7
1,051,771	+		BPHYT_RS04540	0.86	+0.0
1,051,771	+		BPHYT_RS04540	0.86	+0.1
1,051,966	+				+0.9
1,052,335	+				-0.4
1,052,915	+		BPHYT_RS04545	0.46	+0.1
1,053,005	+		BPHYT_RS04545	0.53	+0.7
1,053,006	-		BPHYT_RS04545	0.53	-3.1
1,053,093	-		BPHYT_RS04545	0.60	-0.5
1,053,156	-		BPHYT_RS04545	0.65	-1.9
1,053,288	-		BPHYT_RS04545	0.76	-0.1