Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33435

Experiment: 24hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO11 MOI 1
3,087,309	+		BPHYT_RS33430	0.68	-1.3
3,087,310	-		BPHYT_RS33430	0.68	+0.7
3,087,519	+		BPHYT_RS33430	0.75	-0.2
3,087,520	-		BPHYT_RS33430	0.75	+0.4
3,087,873	+		BPHYT_RS33430	0.87	-0.7
3,087,874	-		BPHYT_RS33430	0.87	-0.6
3,088,060	-				-0.6
3,088,297	-				-0.7
3,088,297	-				+0.6
3,088,417	-		BPHYT_RS33435	0.12	-1.1
3,088,495	-		BPHYT_RS33435	0.19	+0.2
3,088,495	-		BPHYT_RS33435	0.19	-0.3
3,088,664	-		BPHYT_RS33435	0.36	+0.2
3,088,670	+		BPHYT_RS33435	0.36	-1.0
3,088,670	+		BPHYT_RS33435	0.36	-0.1
3,088,671	-		BPHYT_RS33435	0.36	-0.2
3,088,671	-		BPHYT_RS33435	0.36	+0.5
3,088,671	-		BPHYT_RS33435	0.36	+2.2
3,089,089	-		BPHYT_RS33435	0.76	-0.2
3,089,089	-		BPHYT_RS33435	0.76	-1.2
3,089,332	+				-0.6
3,089,369	-				+0.8
3,089,435	-				+0.5
3,089,630	-		BPHYT_RS33440	0.12	-0.3
3,089,630	-		BPHYT_RS33440	0.12	-0.2
3,089,708	+		BPHYT_RS33440	0.20	+0.1
3,089,708	+		BPHYT_RS33440	0.20	+0.2
3,089,708	+		BPHYT_RS33440	0.20	+0.1
3,089,709	-		BPHYT_RS33440	0.20	-0.1
3,089,709	-		BPHYT_RS33440	0.20	-1.4
3,090,303	-		BPHYT_RS33440	0.86	+0.3
3,090,305	+		BPHYT_RS33440	0.86	+0.0
3,090,305	+		BPHYT_RS33440	0.86	+1.2
3,090,306	-		BPHYT_RS33440	0.86	-0.9
3,090,306	-		BPHYT_RS33440	0.86	+0.6
3,090,306	-		BPHYT_RS33440	0.86	+0.1