Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29380
Experiment: 24hr PHYTO11 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 24hr PHYTO11 MOI 1 |
|---|---|---|---|---|---|
| remove | |||||
| 2,146,876 | + | BPHYT_RS29380 | 0.53 | -2.1 | |
| 2,146,977 | - | BPHYT_RS29380 | 0.70 | -0.9 | |
| 2,147,251 | - | -0.9 | |||
| 2,147,329 | - | -0.0 | |||
| 2,147,346 | + | -1.7 | |||
| 2,147,347 | - | -0.0 | |||
| 2,147,660 | - | -0.0 | |||
| 2,147,705 | + | -2.2 | |||
| 2,147,753 | - | +0.3 |
Or see this region's nucleotide sequence