Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS25100

Experiment: 24hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO11 MOI 1
1,202,730	-		BPHYT_RS25095	0.50	-0.9
1,202,842	+		BPHYT_RS25095	0.61	-0.7
1,203,524	-				-0.7
1,204,020	+		BPHYT_RS25100	0.32	+0.6
1,204,020	+		BPHYT_RS25100	0.32	+0.1
1,204,572	+		BPHYT_RS25100	0.72	+0.7
1,204,573	-		BPHYT_RS25100	0.72	-0.6
1,204,999	+				-0.9
1,205,220	+		BPHYT_RS25105	0.12	+0.3
1,205,398	-		BPHYT_RS25105	0.26	+0.1
1,205,398	-		BPHYT_RS25105	0.26	+0.1
1,205,914	-		BPHYT_RS25105	0.68	-0.9
1,205,915	+		BPHYT_RS25105	0.68	+0.6