Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16160

Experiment: 24hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO11 MOI 1
3,665,225	-		BPHYT_RS16155	0.89	-1.5
3,665,289	-				-1.2
3,665,339	-				-0.0
3,665,414	-				-0.8
3,665,443	+				-0.1
3,665,549	+				+0.0
3,665,566	-				-0.1
3,665,566	-				-0.5
3,665,704	-				-0.1
3,665,704	-				+0.1
3,665,704	-				-0.1
3,665,704	-				+0.2
3,665,808	+				+0.2
3,665,808	+				-1.3
3,665,809	-				-0.3
3,665,809	-				-1.1
3,665,809	-				+0.9
3,665,896	+				-2.2
3,665,897	-				+0.7
3,665,897	-				-0.2
3,666,305	-		BPHYT_RS16160	0.35	-1.2
3,666,319	+		BPHYT_RS16160	0.36	-2.2
3,666,320	-		BPHYT_RS16160	0.36	-1.8
3,666,393	+		BPHYT_RS16160	0.41	-0.7
3,666,687	+		BPHYT_RS16160	0.62	-1.1
3,666,709	-		BPHYT_RS16160	0.64	-0.9
3,667,104	-				-0.7
3,667,192	-				+0.4
3,667,224	-				-0.5
3,667,235	-				-0.8
3,667,327	+				-0.6
3,667,328	-				-0.7
3,667,374	+				-1.4
3,667,375	-				-1.2
3,667,375	-				+0.6
3,667,437	-				-0.3