Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14680

Experiment: 24hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO11 MOI 1
3,343,502	+		BPHYT_RS14675	0.37	+0.5
3,343,502	+		BPHYT_RS14675	0.37	+0.9
3,343,502	+		BPHYT_RS14675	0.37	-0.0
3,343,502	+		BPHYT_RS14675	0.37	+1.6
3,343,503	-		BPHYT_RS14675	0.37	+0.2
3,343,503	-		BPHYT_RS14675	0.37	-0.0
3,343,509	-		BPHYT_RS14675	0.37	-0.5
3,343,509	-		BPHYT_RS14675	0.37	-2.3
3,343,592	+		BPHYT_RS14675	0.43	-0.2
3,343,612	-		BPHYT_RS14675	0.45	-0.2
3,343,664	+		BPHYT_RS14675	0.48	-0.4
3,344,460	-				-0.5
3,344,460	-				-0.5
3,344,461	+				+0.2
3,344,461	+				-0.5
3,344,507	+				-0.9
3,344,508	-				+0.8
3,344,669	-		BPHYT_RS14680	0.27	+0.8
3,344,708	-		BPHYT_RS14680	0.32	+1.1
3,344,713	+		BPHYT_RS14680	0.33	-0.2
3,344,714	-		BPHYT_RS14680	0.33	-0.0
3,344,714	-		BPHYT_RS14680	0.33	+0.8
3,345,401	+		BPHYT_RS14685	0.24	-0.4
3,345,722	-		BPHYT_RS14685	0.63	-1.7
3,345,919	+		BPHYT_RS14685	0.87	-0.9
3,345,920	-		BPHYT_RS14685	0.87	-1.3
3,345,993	+				-1.6
3,346,065	+				-0.9
3,346,065	+				-1.3
3,346,066	-				-1.0
3,346,066	-				-0.9