Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12820

Experiment: 24hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO11 MOI 1
2,918,980	+				-1.4
2,919,013	+				-0.3
2,919,225	+		BPHYT_RS12815	0.20	+0.2
2,919,226	-		BPHYT_RS12815	0.20	+0.1
2,919,268	+		BPHYT_RS12815	0.25	+0.9
2,919,269	-		BPHYT_RS12815	0.25	+0.9
2,919,418	+		BPHYT_RS12815	0.44	-0.5
2,919,418	+		BPHYT_RS12815	0.44	+0.1
2,919,418	+		BPHYT_RS12815	0.44	+1.2
2,919,419	-		BPHYT_RS12815	0.44	+1.8
2,919,433	+		BPHYT_RS12815	0.46	-1.4
2,919,703	+		BPHYT_RS12815	0.79	+0.1
2,919,868	+				+1.9
2,919,869	-				+0.9
2,920,008	-				-0.6
2,920,261	+		BPHYT_RS12820	0.24	+1.1
2,920,262	-		BPHYT_RS12820	0.24	+3.1
2,920,262	-		BPHYT_RS12820	0.24	-2.9
2,920,730	-		BPHYT_RS12820	0.64	-2.9
2,920,856	+		BPHYT_RS12820	0.74	-0.6
2,920,857	-		BPHYT_RS12820	0.74	-2.9
2,920,858	+		BPHYT_RS12820	0.74	+1.3
2,920,859	-		BPHYT_RS12820	0.74	-1.5
2,920,859	-		BPHYT_RS12820	0.74	-1.1
2,921,288	+				-0.9
2,921,289	-				+1.0
2,921,331	-				-1.2
2,921,351	+				+0.7
2,921,352	-				+0.2
2,921,352	-				-0.7
2,921,381	+				+0.2
2,921,418	-				+0.0
2,921,418	-				+0.5
2,921,418	-				+0.2
2,921,418	-				-0.3
2,921,489	-				+0.3
2,921,591	+				-0.6