Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11280

Experiment: 24hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO11 MOI 1
2,561,033	+		BPHYT_RS11270	0.47	-0.5
2,561,033	+		BPHYT_RS11270	0.47	+0.3
2,561,034	-		BPHYT_RS11270	0.47	-1.3
2,561,246	+				-1.9
2,561,247	-				-1.0
2,561,370	+		BPHYT_RS11275	0.17	-0.7
2,561,370	+		BPHYT_RS11275	0.17	-0.3
2,561,371	-		BPHYT_RS11275	0.17	+0.1
2,561,515	+		BPHYT_RS11275	0.56	-0.9
2,561,665	-				+0.7
2,561,858	-				-0.1
2,561,902	+				+1.5
2,561,902	+				-0.4
2,561,903	-				+0.8
2,561,903	-				-0.6
2,561,903	-				+0.3
2,561,903	-				+0.9
2,561,998	-		BPHYT_RS11280	0.20	+1.3
2,562,406	+		BPHYT_RS11280	0.70	-1.4
2,562,406	+		BPHYT_RS11280	0.70	-0.6
2,562,469	+		BPHYT_RS11280	0.78	-2.1
2,562,470	-		BPHYT_RS11280	0.78	-1.3
2,562,588	+				+1.3
2,562,632	+				-0.8
2,562,646	-				+0.3
2,562,788	+				+0.2
2,562,799	+				-1.0
2,562,800	-				+0.7
2,563,315	+		BPHYT_RS11285	0.54	-1.6
2,563,437	+		BPHYT_RS11285	0.66	-0.1