Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11185

Experiment: 24hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO11 MOI 1
2,539,812	+		BPHYT_RS11180	0.42	+2.3
2,539,951	+		BPHYT_RS11180	0.50	+0.3
2,539,952	-		BPHYT_RS11180	0.50	+0.0
2,540,064	+		BPHYT_RS11180	0.57	-0.0
2,540,170	-		BPHYT_RS11180	0.63	+1.7
2,540,419	-		BPHYT_RS11180	0.77	-1.4
2,540,509	-		BPHYT_RS11180	0.82	+1.1
2,540,509	-		BPHYT_RS11180	0.82	-0.6
2,540,966	+		BPHYT_RS11185	0.12	-0.7
2,541,007	+		BPHYT_RS11185	0.15	-0.9
2,541,008	-		BPHYT_RS11185	0.15	+0.8
2,541,092	+		BPHYT_RS11185	0.22	-1.3
2,541,257	+		BPHYT_RS11185	0.35	-0.7
2,541,257	+		BPHYT_RS11185	0.35	-1.6
2,541,258	-		BPHYT_RS11185	0.35	+3.3
2,541,381	-		BPHYT_RS11185	0.45	-0.6
2,541,708	-		BPHYT_RS11185	0.70	-0.3
2,541,996	-				-0.2
2,542,100	+				+1.1
2,542,104	-				-1.2
2,542,269	+				-0.1
2,542,272	-				+0.3
2,542,386	-				+0.3
2,542,620	-		BPHYT_RS11190	0.21	+1.3
2,542,746	-		BPHYT_RS11190	0.28	-0.4
2,542,802	+		BPHYT_RS11190	0.31	-1.7
2,542,802	+		BPHYT_RS11190	0.31	-1.3
2,542,802	+		BPHYT_RS11190	0.31	+1.3
2,542,803	-		BPHYT_RS11190	0.31	-0.3
2,542,929	-		BPHYT_RS11190	0.37	+1.0
2,542,937	+		BPHYT_RS11190	0.38	-1.2