Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09795

Experiment: 24hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO11 MOI 1
2,224,970	+		BPHYT_RS09790	0.79	+1.2
2,225,060	+		BPHYT_RS09790	0.87	-0.9
2,225,061	-		BPHYT_RS09790	0.87	-1.0
2,225,312	+				+1.2
2,225,313	-				+1.2
2,225,313	-				-1.0
2,225,316	-				-0.6
2,225,622	-				+0.7
2,225,832	-				-0.2
2,226,234	+		BPHYT_RS09795	0.33	+0.6
2,226,234	+		BPHYT_RS09795	0.33	-0.1
2,226,234	+		BPHYT_RS09795	0.33	-1.0
2,226,235	-		BPHYT_RS09795	0.33	-0.6
2,226,553	-		BPHYT_RS09795	0.68	-0.3
2,226,789	+				+0.1
2,226,790	-				-0.6
2,226,790	-				-1.1
2,226,790	-				-0.0
2,226,791	+				+0.3
2,226,930	+				-0.8
2,227,030	+				-0.1
2,227,227	-				+0.9
2,227,347	+		BPHYT_RS09800	0.41	-0.6
2,227,541	+				+0.3
2,227,541	+				-0.4
2,227,624	+				-1.8
2,227,668	+				-0.1
2,227,789	+				-0.1