Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09785

Experiment: 24hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO11 MOI 1
2,220,438	+		BPHYT_RS09780	0.32	+0.6
2,220,750	+		BPHYT_RS09780	0.53	-0.4
2,221,599	-				-0.6
2,221,764	-		BPHYT_RS09785	0.13	-0.9
2,221,764	-		BPHYT_RS09785	0.13	+0.4
2,221,811	+		BPHYT_RS09785	0.15	-0.2
2,221,886	+		BPHYT_RS09785	0.18	-1.4
2,221,887	-		BPHYT_RS09785	0.18	-0.1
2,221,932	-		BPHYT_RS09785	0.20	-1.2
2,222,084	+		BPHYT_RS09785	0.26	-0.5
2,222,084	+		BPHYT_RS09785	0.26	-0.8
2,222,191	+		BPHYT_RS09785	0.31	+0.4
2,222,693	+		BPHYT_RS09785	0.51	-0.2
2,222,704	+		BPHYT_RS09785	0.52	+0.9
2,223,467	+		BPHYT_RS09785	0.83	-1.7
2,223,468	-		BPHYT_RS09785	0.83	-0.4
2,223,836	+				+2.2
2,223,836	+				-0.7
2,223,837	-				-0.5
2,223,891	-				+2.5
2,223,985	-				+2.2
2,224,091	+				-1.9
2,224,091	+				-0.3
2,224,091	+				-0.6
2,224,092	-				-0.4
2,224,116	+				+0.6
2,224,117	-				+1.2
2,224,205	+		BPHYT_RS09790	0.16	-1.5
2,224,295	+		BPHYT_RS09790	0.24	-0.7
2,224,340	+		BPHYT_RS09790	0.27	-0.1
2,224,520	+		BPHYT_RS09790	0.42	-2.4
2,224,520	+		BPHYT_RS09790	0.42	-1.1
2,224,521	-		BPHYT_RS09790	0.42	-1.1
2,224,859	+		BPHYT_RS09790	0.70	+0.3