Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08975

Experiment: 24hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO11 MOI 1
2,030,920	-		BPHYT_RS08965	0.52	-0.3
2,031,579	+				-2.5
2,031,864	-				-0.3
2,031,864	-				-0.6
2,031,875	-				-0.8
2,031,875	-				-0.6
2,032,033	+		BPHYT_RS08975	0.33	-0.9
2,032,033	+		BPHYT_RS08975	0.33	-0.8
2,032,034	-		BPHYT_RS08975	0.33	-1.2
2,032,135	+		BPHYT_RS08975	0.54	+0.2
2,032,136	-		BPHYT_RS08975	0.54	-1.4
2,032,196	+		BPHYT_RS08975	0.67	-0.8
2,032,197	-		BPHYT_RS08975	0.67	-0.8
2,032,433	-				+0.2
2,032,433	-				-0.6
2,032,433	-				-0.7
2,032,453	+				+0.1
2,032,657	+		BPHYT_RS08980	0.26	+1.3
2,032,771	+		BPHYT_RS08980	0.47	+0.2
2,032,771	+		BPHYT_RS08980	0.47	+0.3
2,032,771	+		BPHYT_RS08980	0.47	+1.0
2,032,771	+		BPHYT_RS08980	0.47	+0.0
2,032,950	-		BPHYT_RS08980	0.80	-0.4
2,032,969	+		BPHYT_RS08980	0.84	+0.8
2,033,083	-				-0.7
2,033,152	+				+0.5
2,033,209	-				+0.6
2,033,316	+				-0.5
2,033,349	+				-0.7
2,033,349	+				+0.3
2,033,350	-				-1.7