Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08890

Experiment: 24hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO11 MOI 1
2,010,891	+		BPHYT_RS08885	0.25	+0.8
2,010,949	-		BPHYT_RS08885	0.30	+0.6
2,011,200	+		BPHYT_RS08885	0.55	+0.8
2,011,201	-		BPHYT_RS08885	0.55	+0.0
2,011,201	-		BPHYT_RS08885	0.55	+0.2
2,011,201	-		BPHYT_RS08885	0.55	+1.5
2,011,201	-		BPHYT_RS08885	0.55	+1.6
2,011,248	-		BPHYT_RS08885	0.60	+1.6
2,011,326	+		BPHYT_RS08885	0.68	+0.0
2,011,651	-				+0.7
2,011,763	+				-0.6
2,011,763	+				-0.3
2,011,764	-				+0.5
2,011,764	-				+1.7
2,011,764	-				-0.2
2,011,764	-				+0.3
2,011,917	+		BPHYT_RS08890	0.26	-0.1
2,011,976	+		BPHYT_RS08890	0.33	+0.2
2,011,980	-		BPHYT_RS08890	0.33	+0.3
2,012,037	+		BPHYT_RS08890	0.40	+0.1
2,012,038	-		BPHYT_RS08890	0.41	+0.3
2,012,156	+		BPHYT_RS08890	0.55	-2.0
2,012,156	+		BPHYT_RS08890	0.55	+1.2
2,012,156	+		BPHYT_RS08890	0.55	+1.5
2,012,157	-		BPHYT_RS08890	0.55	+0.6
2,012,157	-		BPHYT_RS08890	0.55	+0.2
2,012,162	+		BPHYT_RS08890	0.56	+0.8
2,012,162	+		BPHYT_RS08890	0.56	+0.0
2,012,163	-		BPHYT_RS08890	0.56	-0.5
2,012,172	-		BPHYT_RS08890	0.57	+1.2
2,012,257	+		BPHYT_RS08890	0.68	+0.6
2,012,257	+		BPHYT_RS08890	0.68	-1.5
2,012,257	+		BPHYT_RS08890	0.68	+0.1
2,012,258	-		BPHYT_RS08890	0.68	+0.8
2,012,258	-		BPHYT_RS08890	0.68	+0.6
2,012,554	+				-0.8
2,012,554	+				+1.5
2,012,555	-				+1.0
2,012,555	-				-0.7
2,012,593	-				-1.1
2,012,644	+				-2.2
2,012,645	-				+0.6
2,012,645	-				+0.6
2,012,655	-				+1.5
2,012,732	-				+0.7
2,012,776	-				-0.2
2,012,789	+				+0.7
2,013,372	+		BPHYT_RS08895	0.41	+0.3
2,013,438	+		BPHYT_RS08895	0.46	-0.8
2,013,464	-		BPHYT_RS08895	0.48	+0.1