Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05810

Experiment: 24hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO11 MOI 1
1,322,596	+		BPHYT_RS05805	0.87	-0.4
1,322,713	+		BPHYT_RS05805	0.90	-0.3
1,322,713	+				+0.1
1,322,773	+				+0.3
1,322,947	+				-0.3
1,323,296	+				-0.1
1,323,296	+				+0.3
1,323,296	+				-1.2
1,323,296	+				+0.5
1,323,296	+				-0.1
1,323,303	+				-0.7
1,323,556	-		BPHYT_RS05810	0.21	-1.5
1,323,808	-		BPHYT_RS05810	0.38	-2.1
1,323,847	-		BPHYT_RS05810	0.40	-0.4
1,323,882	+		BPHYT_RS05810	0.43	-1.4
1,324,336	-		BPHYT_RS05810	0.74	-0.8
1,324,348	-		BPHYT_RS05810	0.75	-0.2
1,324,677	-				-0.3
1,324,729	+				-0.2
1,324,898	-		BPHYT_RS05815	0.16	-1.2
1,325,166	-		BPHYT_RS05815	0.47	-0.4
1,325,181	+		BPHYT_RS05815	0.48	-0.5
1,325,256	-		BPHYT_RS05815	0.57	+0.6
1,325,316	-		BPHYT_RS05815	0.64	+0.0
1,325,685	+				-2.4
1,325,715	+				+0.8
1,325,716	-				-0.2
1,325,716	-				+0.5