Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05220

Experiment: 24hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO11 MOI 1
1,201,089	-				+0.4
1,201,155	-				+0.0
1,201,348	+		BPHYT_RS05215	0.32	-1.9
1,201,348	+		BPHYT_RS05215	0.32	-1.1
1,201,348	+		BPHYT_RS05215	0.32	+0.3
1,201,499	+		BPHYT_RS05215	0.51	-0.4
1,201,500	-		BPHYT_RS05215	0.51	-0.2
1,201,500	-		BPHYT_RS05215	0.51	-1.7
1,201,500	-		BPHYT_RS05215	0.51	-0.2
1,201,607	+		BPHYT_RS05215	0.64	+0.3
1,201,607	+		BPHYT_RS05215	0.64	-0.8
1,201,607	+		BPHYT_RS05215	0.64	-1.1
1,201,920	+				-0.3
1,201,962	-				-0.1
1,201,968	+				-0.6
1,201,968	+				-1.1
1,202,035	+				-0.5
1,202,035	+				-0.5
1,202,035	+				-1.6
1,202,036	-				-0.2
1,202,106	-				-0.1
1,202,259	-				+4.9
1,202,521	+		BPHYT_RS05220	0.62	+0.2
1,202,557	+		BPHYT_RS05220	0.67	-0.1
1,203,063	-				-0.8
1,203,563	+		BPHYT_RS05225	0.20	+0.3
1,203,564	-		BPHYT_RS05225	0.20	+0.5
1,203,564	-		BPHYT_RS05225	0.20	-0.2
1,203,587	+		BPHYT_RS05225	0.20	+0.2