Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33815

Experiment: 24hr PHYTO8 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO8 MOI 1
3,177,788	-		BPHYT_RS33805	0.62	-0.3
3,178,114	-		BPHYT_RS33810	0.37	-0.8
3,178,114	-		BPHYT_RS33810	0.37	+0.7
3,178,356	+		BPHYT_RS33810	0.70	+0.7
3,178,599	-				-1.2
3,179,066	+		BPHYT_RS33815	0.32	-1.2
3,179,067	-		BPHYT_RS33815	0.33	-0.7
3,179,067	-		BPHYT_RS33815	0.33	-0.7
3,179,067	-		BPHYT_RS33815	0.33	+0.8
3,179,432	+		BPHYT_RS33815	0.60	-0.2
3,179,520	-		BPHYT_RS33815	0.66	-0.1
3,179,541	-		BPHYT_RS33815	0.68	-1.4
3,180,006	-				-0.8
3,180,006	-				+0.1
3,180,006	-				-1.9
3,180,006	-				-0.2
3,180,007	+				-0.6
3,180,008	-				-0.3
3,180,008	-				+0.5
3,180,008	-				+0.9
3,180,315	-		BPHYT_RS33820	0.30	+2.5
3,180,542	-		BPHYT_RS33820	0.58	+2.4
3,180,542	-		BPHYT_RS33820	0.58	+2.6
3,180,567	-		BPHYT_RS33820	0.61	+2.6
3,180,600	+		BPHYT_RS33820	0.65	+2.6
3,180,678	+		BPHYT_RS33820	0.74	+2.6
3,180,713	+				+2.3
3,180,713	+		BPHYT_RS33820	0.79	+2.5
3,180,714	-		BPHYT_RS33820	0.79	+2.9
3,180,714	-		BPHYT_RS33820	0.79	+2.6
3,180,723	+		BPHYT_RS33820	0.80	+2.3
3,180,723	+		BPHYT_RS33820	0.80	+2.5
3,180,723	+		BPHYT_RS33820	0.80	+2.6
3,180,723	+		BPHYT_RS33820	0.80	+2.5
3,180,723	+		BPHYT_RS33820	0.80	+2.9
3,180,724	-		BPHYT_RS33820	0.80	+2.8
3,180,724	-		BPHYT_RS33820	0.80	+2.6
3,180,724	-		BPHYT_RS33820	0.80	+2.6
3,180,935	+				-0.7
3,180,937	+				+0.5