Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28085

Experiment: 24hr PHYTO8 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO8 MOI 1
1,863,482	+				+0.9
1,863,482	+				-1.2
1,863,482	+				+0.1
1,863,771	-				-0.6
1,863,773	+				-0.1
1,863,774	-				-0.1
1,863,774	-				-1.8
1,863,829	+				-0.1
1,864,126	-		BPHYT_RS28085	0.13	+1.3
1,864,355	+		BPHYT_RS28085	0.25	+1.3
1,864,741	+		BPHYT_RS28085	0.44	-0.2
1,865,330	-		BPHYT_RS28085	0.74	-0.8
1,865,330	-		BPHYT_RS28085	0.74	+0.5
1,865,333	-		BPHYT_RS28085	0.74	-2.9
1,865,812	-				+0.3
1,865,890	+				+0.7
1,865,891	-				-1.8
1,866,104	+		BPHYT_RS28090	0.58	-0.3
1,866,105	-		BPHYT_RS28090	0.58	-1.2
1,866,153	-		BPHYT_RS28090	0.73	-0.3
1,866,153	-		BPHYT_RS28090	0.73	+0.3
1,866,575	-		BPHYT_RS28100	0.45	+0.3
1,866,591	+		BPHYT_RS28100	0.53	-0.6
1,866,648	+		BPHYT_RS28100	0.82	-0.3
1,866,649	-		BPHYT_RS28100	0.83	+0.0
1,866,773	-				+0.4
1,866,811	+		BPHYT_RS28105	0.11	+0.6