Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26910
Experiment: 24hr PHYTO8 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 24hr PHYTO8 MOI 1 |
---|---|---|---|---|---|
remove | |||||
1,610,232 | + | BPHYT_RS26910 | 0.89 | +0.9 | |
1,610,232 | + | BPHYT_RS26910 | 0.89 | +0.3 | |
1,610,294 | - | +0.4 | |||
1,610,696 | + | +0.0 | |||
1,610,783 | - | +1.2 | |||
1,610,783 | - | +1.2 | |||
1,611,045 | - | -0.3 | |||
1,611,089 | - | -0.8 | |||
1,611,148 | + | +1.2 | |||
1,611,149 | - | +0.2 | |||
1,611,188 | - | +0.0 | |||
1,611,199 | - | -0.4 |
Or see this region's nucleotide sequence