Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24570

Experiment: 24hr PHYTO8 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO8 MOI 1
1,081,928	-		BPHYT_RS24565	0.63	+0.6
1,082,501	+				-1.8
1,082,602	+				+1.8
1,082,603	-				-0.6
1,082,622	-				+0.3
1,082,981	-				+0.5
1,082,981	-				+0.8
1,083,038	-		BPHYT_RS24570	0.13	-0.8
1,083,038	-		BPHYT_RS24570	0.13	+0.1
1,083,265	+		BPHYT_RS24570	0.32	-0.2
1,083,323	-		BPHYT_RS24570	0.37	-0.6
1,083,373	+		BPHYT_RS24570	0.42	+0.1
1,083,415	+		BPHYT_RS24570	0.45	-0.7
1,083,417	+		BPHYT_RS24570	0.45	-0.2
1,083,417	+		BPHYT_RS24570	0.45	-0.4
1,083,418	-		BPHYT_RS24570	0.45	-0.4
1,083,418	-		BPHYT_RS24570	0.45	+0.1
1,083,476	-		BPHYT_RS24570	0.50	-0.6
1,083,508	+		BPHYT_RS24570	0.53	-0.9
1,083,613	+		BPHYT_RS24570	0.62	+0.8
1,083,614	-		BPHYT_RS24570	0.62	-0.7
1,083,647	-		BPHYT_RS24570	0.65	-0.2
1,083,649	-		BPHYT_RS24570	0.65	+0.6
1,083,739	+		BPHYT_RS24570	0.73	-1.2
1,083,786	-		BPHYT_RS24570	0.77	-1.0
1,083,809	-		BPHYT_RS24570	0.79	-0.1
1,083,809	-		BPHYT_RS24570	0.79	-1.0
1,083,823	+		BPHYT_RS24570	0.80	-0.7
1,083,883	+		BPHYT_RS24570	0.86	-0.1
1,084,202	+		BPHYT_RS24575	0.67	+0.1
1,084,242	-				-0.2
1,084,359	-		BPHYT_RS24580	0.26	-0.6
1,084,737	-				+0.2
1,084,742	+				-0.7
1,084,999	+		BPHYT_RS24585	0.30	+0.4