Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24550

Experiment: 24hr PHYTO8 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO8 MOI 1
1,077,604	+		BPHYT_RS24545	0.81	+0.1
1,077,605	-		BPHYT_RS24545	0.81	+0.1
1,077,734	-		BPHYT_RS24545	0.86	-2.7
1,078,106	+				-1.3
1,078,107	-				-0.9
1,078,107	-				-0.1
1,078,294	+				-0.5
1,078,294	+				+2.3
1,078,295	-				+0.5
1,078,513	-		BPHYT_RS24550	0.48	+0.9
1,078,513	-		BPHYT_RS24550	0.48	+0.7
1,078,513	-		BPHYT_RS24550	0.48	+0.6
1,078,558	-		BPHYT_RS24550	0.64	-0.6
1,078,674	+				+0.4
1,078,674	+				+0.9
1,078,675	-				-1.3
1,078,675	-				-0.2
1,078,675	-				-0.6
1,078,696	-				+1.7
1,078,696	-				-1.0
1,078,751	+				-1.1
1,078,813	+				+0.4
1,078,813	+				-0.0
1,078,814	-				-0.0
1,078,857	+				-0.0
1,078,858	-				+0.8
1,078,858	-				-0.3
1,078,858	-				-0.1
1,078,906	+				+0.5
1,078,946	+				-0.0
1,078,947	-				-0.2
1,079,023	+				+0.9
1,079,023	+				-0.0
1,079,024	-				-0.3
1,079,122	-				-0.3
1,079,206	+		BPHYT_RS24555	0.16	-0.7