Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS18395

Experiment: 24hr PHYTO8 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO8 MOI 1
4,136,524	+				+0.6
4,136,622	+				-0.0
4,136,622	+				-0.3
4,136,622	+				-2.0
4,136,623	-				+0.6
4,136,698	+				+0.4
4,136,699	-				+1.0
4,136,874	+				+0.6
4,136,874	+				+0.0
4,136,875	-				-0.7
4,136,967	+				-1.1
4,136,968	-				-0.8
4,136,985	+				-0.4
4,137,028	-				+0.4
4,137,031	+				+0.8
4,137,031	+				-0.3
4,137,072	+				+0.4
4,137,072	+				-1.0
4,137,104	+				+0.1
4,137,104	+				-1.9
4,137,189	-				+0.3
4,137,253	+				-0.1
4,137,308	+				-0.7
4,137,340	+				+0.6
4,137,398	+				-0.1
4,137,403	-				-0.6
4,137,408	+				-0.4
4,137,408	+				+0.4
4,137,408	+				-0.3
4,137,409	-				-0.8
4,137,409	-				+0.5
4,137,412	+				-0.5
4,137,416	+				-0.0
4,137,416	+				-0.4
4,137,418	+				-0.1
4,137,419	-				+2.2
4,137,422	+				-0.0
4,137,422	+				+0.6
4,137,438	+				+1.0
4,137,438	+				+0.2
4,137,439	-				-1.3
4,137,439	-				-0.4
4,137,443	+				-0.8
4,137,444	-				+1.0
4,137,467	-				+3.2
4,137,685	+		BPHYT_RS18395	0.24	+0.8
4,137,719	+		BPHYT_RS18395	0.29	-0.1
4,137,720	-		BPHYT_RS18395	0.29	+0.5
4,137,720	-		BPHYT_RS18395	0.29	+0.9
4,137,720	-		BPHYT_RS18395	0.29	+1.2
4,137,831	+		BPHYT_RS18395	0.45	+1.4
4,138,010	+		BPHYT_RS18395	0.71	+0.8
4,138,051	-		BPHYT_RS18395	0.77	-2.2
4,138,141	-				+0.3
4,138,253	+				+0.4
4,138,298	+				-0.9
4,138,298	+				+0.1
4,138,299	-				+0.9
4,138,364	+				-1.3
4,138,398	+				-1.6
4,138,398	+				-0.4
4,138,398	+				+0.1
4,138,593	-		BPHYT_RS18400	0.35	+1.3
4,138,654	-		BPHYT_RS18400	0.45	-0.6
4,138,654	-		BPHYT_RS18400	0.45	+0.9
4,138,655	+		BPHYT_RS18400	0.45	+0.1
4,138,656	-		BPHYT_RS18400	0.45	-1.0
4,138,656	-		BPHYT_RS18400	0.45	+1.2
4,138,656	-		BPHYT_RS18400	0.45	-0.6
4,138,656	-		BPHYT_RS18400	0.45	-0.2
4,138,662	-		BPHYT_RS18400	0.46	-0.4
4,138,662	-		BPHYT_RS18400	0.46	+0.7
4,138,713	+		BPHYT_RS18400	0.54	+0.3
4,138,850	+		BPHYT_RS18400	0.75	+0.1
4,138,928	+		BPHYT_RS18400	0.87	-2.4
4,139,002	+				+0.8
4,139,013	+				+1.6
4,139,013	+				+0.1
4,139,047	+				+1.0
4,139,048	-				+2.1
4,139,049	+				-0.6
4,139,049	+				+0.2
4,139,050	-				+0.4
4,139,050	-				+1.7
4,139,050	-				+0.7
4,139,050	-				-1.9
4,139,050	-				-0.4
4,139,050	-				-0.8
4,139,083	+				-0.5
4,139,083	+				-0.4