Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17420

Experiment: 24hr PHYTO8 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO8 MOI 1
3,946,059	+				-1.3
3,946,059	+				+1.1
3,946,191	+				+0.1
3,946,192	-				-1.0
3,946,269	+		BPHYT_RS17420	0.13	+0.5
3,946,380	+		BPHYT_RS17420	0.32	+0.2
3,946,381	-		BPHYT_RS17420	0.32	-0.5
3,946,381	-		BPHYT_RS17420	0.32	+0.8
3,946,381	-		BPHYT_RS17420	0.32	-0.5
3,946,436	-		BPHYT_RS17420	0.41	+2.1
3,946,464	+		BPHYT_RS17420	0.46	-0.7
3,946,464	+		BPHYT_RS17420	0.46	+0.5
3,946,464	+		BPHYT_RS17420	0.46	+0.1
3,946,465	-		BPHYT_RS17420	0.46	-1.8
3,946,497	+		BPHYT_RS17420	0.51	-0.0
3,946,891	-				+0.2
3,947,008	+				+0.2
3,947,008	+				-1.2
3,947,009	-				+0.1
3,947,009	-				+0.0
3,947,077	-				+0.0
3,947,447	-		BPHYT_RS17425	0.28	-1.0
3,947,508	-		BPHYT_RS17425	0.32	+0.6
3,947,566	+		BPHYT_RS17425	0.35	-0.1
3,947,566	+		BPHYT_RS17425	0.35	+0.4
3,947,569	+		BPHYT_RS17425	0.35	-0.2
3,947,569	+		BPHYT_RS17425	0.35	+0.5
3,947,569	+		BPHYT_RS17425	0.35	-0.9
3,947,570	-		BPHYT_RS17425	0.35	-0.2
3,947,666	+		BPHYT_RS17425	0.40	+0.0
3,947,758	+		BPHYT_RS17425	0.46	+1.1
3,947,759	-		BPHYT_RS17425	0.46	-0.9
3,947,759	-		BPHYT_RS17425	0.46	-0.3
3,947,761	+		BPHYT_RS17425	0.46	+1.5
3,947,761	+		BPHYT_RS17425	0.46	-0.9
3,947,762	-		BPHYT_RS17425	0.46	-1.0