Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15885
Experiment: 24hr PHYTO8 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 24hr PHYTO8 MOI 1 |
---|---|---|---|---|---|
remove | |||||
3,606,620 | + | -1.1 | |||
3,606,820 | + | -0.8 | |||
3,606,820 | + | -1.7 | |||
3,606,824 | + | -0.6 | |||
3,606,824 | + | -0.8 | |||
3,607,505 | + | -0.7 | |||
3,607,709 | + | -0.9 | |||
3,607,710 | - | -0.5 | |||
3,607,738 | - | -0.4 | |||
3,607,753 | + | -1.0 | |||
3,608,445 | + | BPHYT_RS15890 | 0.88 | +1.7 |
Or see this region's nucleotide sequence