Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11265

Experiment: 24hr PHYTO8 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO8 MOI 1
2,559,423	+		BPHYT_RS11260	0.56	-0.4
2,559,509	+		BPHYT_RS11260	0.66	-0.7
2,559,510	-		BPHYT_RS11260	0.66	+1.5
2,559,618	-		BPHYT_RS11260	0.78	-0.4
2,559,841	-				-0.8
2,559,856	-				-0.6
2,559,856	-				-0.5
2,559,869	+				-0.3
2,559,883	+				+0.3
2,559,886	+				-0.1
2,559,886	+				+0.5
2,559,886	+				-0.5
2,559,887	-				-0.1
2,559,887	-				-0.2
2,559,889	+				+0.3
2,560,029	-				-0.6
2,560,316	-		BPHYT_RS11265	0.59	-1.4
2,560,526	-				-0.1
2,560,526	-				+1.7
2,560,530	-				+0.0
2,560,581	+				-0.8
2,561,033	+		BPHYT_RS11270	0.47	-0.9
2,561,033	+		BPHYT_RS11270	0.47	-1.2
2,561,034	-		BPHYT_RS11270	0.47	-0.6
2,561,246	+				-0.4
2,561,247	-				-0.0
2,561,370	+		BPHYT_RS11275	0.17	-1.3
2,561,370	+		BPHYT_RS11275	0.17	-0.4
2,561,371	-		BPHYT_RS11275	0.17	+0.1
2,561,515	+		BPHYT_RS11275	0.56	-0.8