Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09290

Experiment: 24hr PHYTO8 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO8 MOI 1
2,103,787	-		BPHYT_RS09285	0.36	+0.2
2,103,845	+		BPHYT_RS09285	0.40	-0.5
2,103,846	-		BPHYT_RS09285	0.40	+2.3
2,103,899	+				+1.0
2,103,899	+		BPHYT_RS09285	0.45	-0.0
2,103,900	-		BPHYT_RS09285	0.45	+0.5
2,103,900	-		BPHYT_RS09285	0.45	+0.3
2,104,236	-		BPHYT_RS09285	0.73	-0.2
2,104,237	+		BPHYT_RS09285	0.73	-0.4
2,104,237	+		BPHYT_RS09285	0.73	+0.0
2,104,603	-				+0.2
2,104,720	-				-0.9
2,105,099	-		BPHYT_RS09290	0.11	+0.7
2,105,361	+		BPHYT_RS09290	0.18	+1.6
2,105,362	-		BPHYT_RS09290	0.18	-0.9
2,105,600	+		BPHYT_RS09290	0.25	-0.4
2,105,600	+		BPHYT_RS09290	0.25	-1.5
2,105,600	+		BPHYT_RS09290	0.25	-0.3
2,105,601	-		BPHYT_RS09290	0.25	-0.1
2,105,679	-		BPHYT_RS09290	0.27	+0.3
2,106,423	+		BPHYT_RS09290	0.49	+0.8
2,106,424	-		BPHYT_RS09290	0.49	+1.7
2,106,478	-		BPHYT_RS09290	0.50	-0.3
2,106,634	-		BPHYT_RS09290	0.55	+0.3
2,106,712	+		BPHYT_RS09290	0.57	-0.3
2,106,714	+		BPHYT_RS09290	0.57	+1.3
2,106,714	+		BPHYT_RS09290	0.57	-0.1
2,106,714	+		BPHYT_RS09290	0.57	+0.9
2,106,846	+		BPHYT_RS09290	0.61	-1.0
2,107,294	+		BPHYT_RS09290	0.74	+2.3
2,107,398	+		BPHYT_RS09290	0.77	-0.1
2,107,693	-		BPHYT_RS09290	0.85	-0.9
2,107,801	-		BPHYT_RS09290	0.88	+0.5
2,108,178	+				+2.3
2,108,206	+				+0.3
2,108,252	-				-0.5
2,108,282	+				+0.9
2,108,283	-				-0.5
2,108,288	-				+0.3