Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07620

Experiment: 24hr PHYTO8 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO8 MOI 1
1,733,323	+		BPHYT_RS07615	0.54	+0.3
1,733,357	-		BPHYT_RS07615	0.56	+0.1
1,733,357	-		BPHYT_RS07615	0.56	-0.3
1,733,393	-		BPHYT_RS07615	0.58	-0.2
1,733,719	+		BPHYT_RS07615	0.81	-0.5
1,733,743	+		BPHYT_RS07615	0.82	+0.6
1,733,744	-		BPHYT_RS07615	0.82	+0.0
1,733,744	-		BPHYT_RS07615	0.82	+0.6
1,733,875	-				-0.1
1,733,963	-				+0.3
1,734,353	+		BPHYT_RS07620	0.23	-1.3
1,734,446	-		BPHYT_RS07620	0.30	-0.3
1,734,673	+		BPHYT_RS07620	0.48	-0.6
1,734,674	-		BPHYT_RS07620	0.48	-1.0
1,734,679	+		BPHYT_RS07620	0.49	+0.0
1,734,843	-		BPHYT_RS07620	0.62	+0.1
1,734,941	-		BPHYT_RS07620	0.70	-0.6
1,735,003	+		BPHYT_RS07620	0.74	+0.7
1,735,286	+				-1.2
1,735,341	-				-0.3
1,735,542	+				+0.4
1,735,543	-				-1.1
1,735,567	+				+0.2
1,735,996	+		BPHYT_RS07625	0.24	-0.8
1,735,997	-		BPHYT_RS07625	0.24	-1.6
1,736,167	+		BPHYT_RS07625	0.39	-0.1
1,736,168	-		BPHYT_RS07625	0.39	-0.1
1,736,168	-		BPHYT_RS07625	0.39	+1.2