Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04115

Experiment: 24hr PHYTO8 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO8 MOI 1
938,251	+				-0.3
938,313	+				-0.9
938,325	-				-0.5
938,398	+				-1.0
938,416	+				-0.6
938,416	+				+1.8
938,573	-				-0.5
938,745	-				+0.3
938,763	-				-0.4
938,823	-				-0.5
938,929	-				+1.0
939,233	+		BPHYT_RS04115	0.21	+0.0
939,757	+		BPHYT_RS04115	0.57	+0.6
939,757	+		BPHYT_RS04115	0.57	-0.1
939,833	+		BPHYT_RS04115	0.63	+1.2
940,035	-		BPHYT_RS04115	0.77	+2.9
940,254	+				+0.8
940,271	+				-0.4
940,272	-				+0.9
940,404	+				-0.4
940,919	-				-0.1