Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35235

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
3,507,987	+		BPHYT_RS35230	0.23	+0.8
3,508,253	-		BPHYT_RS35230	0.61	+0.6
3,508,253	-				+2.2
3,508,579	+				+0.8
3,508,628	-				+0.3
3,508,698	-				-1.5
3,508,783	-		BPHYT_RS35235	0.13	-1.4
3,509,141	+		BPHYT_RS35235	0.71	-0.7
3,509,325	+				-1.1
3,509,628	+		BPHYT_RS35240	0.43	+0.1
3,509,628	+		BPHYT_RS35240	0.43	-0.4
3,509,628	+		BPHYT_RS35240	0.43	+0.2
3,509,628	+		BPHYT_RS35240	0.43	-0.2
3,509,730	+		BPHYT_RS35240	0.61	+0.1
3,509,784	+		BPHYT_RS35240	0.70	-1.0
3,509,785	-		BPHYT_RS35240	0.70	-0.2
3,509,944	-				-0.9
3,510,087	-				-1.6
3,510,129	+		BPHYT_RS35245	0.25	-0.3
3,510,129	+		BPHYT_RS35245	0.25	-0.8
3,510,210	-		BPHYT_RS35245	0.71	+0.6
3,510,270	+				-0.8