Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33420

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
3,082,636	-				-1.3
3,082,637	+				+1.1
3,082,683	-				-1.6
3,082,763	-				-2.0
3,082,763	-				-0.2
3,082,815	-				-0.2
3,083,313	+		BPHYT_RS33415	0.77	+0.2
3,083,314	-		BPHYT_RS33415	0.77	-1.5
3,083,314	-		BPHYT_RS33415	0.77	-3.1
3,083,314	-		BPHYT_RS33415	0.77	-0.8
3,083,387	+		BPHYT_RS33415	0.88	-0.4
3,083,783	+		BPHYT_RS33420	0.42	+0.9
3,083,783	+		BPHYT_RS33420	0.42	+0.3
3,083,784	-		BPHYT_RS33420	0.42	+1.0
3,083,800	+		BPHYT_RS33420	0.46	-0.5
3,083,801	-		BPHYT_RS33420	0.46	-0.4
3,083,843	-		BPHYT_RS33420	0.55	-0.4
3,083,855	-		BPHYT_RS33420	0.58	+0.2
3,083,954	-		BPHYT_RS33420	0.80	+0.3
3,083,954	-		BPHYT_RS33420	0.80	+0.7
3,083,954	-		BPHYT_RS33420	0.80	-0.4
3,083,954	-		BPHYT_RS33420	0.80	+2.1
3,083,964	-		BPHYT_RS33420	0.82	-0.3
3,083,964	-		BPHYT_RS33420	0.82	-0.5
3,084,054	-				+1.0
3,084,144	-				-0.3
3,084,230	-				+0.3
3,084,303	+				+0.8
3,084,327	+				-0.1
3,084,330	+				-2.3