Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32700

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
2,911,931	+		BPHYT_RS32695	0.36	+1.0
2,911,937	+		BPHYT_RS32695	0.37	+0.3
2,911,938	-		BPHYT_RS32695	0.37	+0.9
2,912,071	+		BPHYT_RS32695	0.53	+0.3
2,912,116	-		BPHYT_RS32695	0.59	-2.4
2,912,141	+		BPHYT_RS32695	0.62	+0.3
2,912,165	+		BPHYT_RS32695	0.65	+0.1
2,912,166	-		BPHYT_RS32695	0.65	+0.2
2,912,414	-				-0.5
2,912,499	+				+2.4
2,912,500	-				-0.4
2,912,500	-				+1.1
2,912,753	-				+0.3
2,913,019	+		BPHYT_RS32700	0.13	-1.3
2,913,020	-		BPHYT_RS32700	0.13	+0.2
2,913,020	-		BPHYT_RS32700	0.13	-0.2
2,913,551	+		BPHYT_RS32700	0.40	-2.2
2,913,551	+		BPHYT_RS32700	0.40	-0.4
2,913,552	-		BPHYT_RS32700	0.40	-0.3
2,913,552	-		BPHYT_RS32700	0.40	+1.1
2,913,552	-		BPHYT_RS32700	0.40	+2.0
2,913,777	+		BPHYT_RS32700	0.52	-1.1
2,913,778	-		BPHYT_RS32700	0.52	-1.0
2,913,878	+		BPHYT_RS32700	0.57	-1.6
2,913,955	+		BPHYT_RS32700	0.62	+0.5
2,913,956	-		BPHYT_RS32700	0.62	+0.4
2,913,958	+		BPHYT_RS32700	0.62	-1.0
2,914,347	-		BPHYT_RS32700	0.82	-1.2
2,914,419	+		BPHYT_RS32700	0.86	-1.1
2,914,690	+				-1.8
2,914,716	-				-2.0
2,914,804	-				-0.0
2,914,827	+				+1.1
2,914,827	+				+0.3
2,914,827	+				-1.8
2,915,076	+		BPHYT_RS32710	0.15	-0.5
2,915,127	-		BPHYT_RS32710	0.21	-3.0
2,915,159	-		BPHYT_RS32710	0.25	-0.2
2,915,373	+		BPHYT_RS32710	0.53	-1.2
2,915,510	-		BPHYT_RS32710	0.70	+0.4
2,915,675	-				+0.8
2,915,675	-				+0.3