Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29720

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
2,219,308	+		BPHYT_RS29715	0.63	-0.1
2,219,308	+		BPHYT_RS29715	0.63	-1.0
2,219,850	-		BPHYT_RS29715	0.87	-0.9
2,219,871	+		BPHYT_RS29715	0.88	+1.4
2,219,953	-				+0.9
2,220,003	+				-0.8
2,220,056	-				-0.5
2,220,107	+				+0.0
2,220,239	+				-1.4
2,220,335	-		BPHYT_RS29720	0.14	-1.0
2,220,659	+		BPHYT_RS29720	0.69	-3.1
2,220,869	-				-0.4
2,220,892	-				-1.5
2,220,946	+				+0.1
2,220,990	+				+0.3
2,221,108	-		BPHYT_RS29725	0.31	-0.3
2,221,108	-		BPHYT_RS29725	0.31	+3.0
2,221,132	+		BPHYT_RS29725	0.35	+1.8
2,221,530	+				+0.2
2,221,531	-				+1.1
2,221,531	-				-0.4
2,221,564	+				+2.0
2,221,573	+				+1.7
2,221,773	+				+0.2
2,221,818	+				-0.9