Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28690

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
1,988,972	-		BPHYT_RS28685	0.53	+0.3
1,989,188	+		BPHYT_RS28685	0.67	-1.7
1,989,189	-		BPHYT_RS28685	0.67	+0.1
1,989,519	-				-0.5
1,989,842	-				+0.6
1,990,241	-		BPHYT_RS28690	0.33	-1.7
1,990,614	+		BPHYT_RS28690	0.57	-1.0
1,991,288	+				-0.8
1,991,289	-				+1.3
1,991,294	+				+1.0
1,991,336	+				-0.0
1,991,336	+				-0.2
1,991,337	-				+0.2
1,991,605	+				+0.4
1,991,643	+				+0.7
1,991,673	-				+0.0
1,991,742	+		BPHYT_RS28695	0.15	-0.3
1,992,052	+		BPHYT_RS28695	0.36	-0.0
1,992,140	+		BPHYT_RS28695	0.42	+0.0
1,992,141	-		BPHYT_RS28695	0.42	-0.6
1,992,181	-		BPHYT_RS28695	0.45	-0.1