Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28480

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
1,942,762	-		BPHYT_RS28475	0.35	-1.5
1,942,956	+		BPHYT_RS28475	0.51	-0.5
1,942,957	-		BPHYT_RS28475	0.51	-0.4
1,942,999	+		BPHYT_RS28475	0.55	-1.4
1,943,000	-		BPHYT_RS28475	0.55	+0.7
1,943,029	-		BPHYT_RS28475	0.57	-2.3
1,943,029	-		BPHYT_RS28475	0.57	-1.0
1,943,151	+		BPHYT_RS28475	0.68	+1.1
1,943,152	-		BPHYT_RS28475	0.68	+0.3
1,943,214	-		BPHYT_RS28475	0.73	+2.1
1,943,217	+		BPHYT_RS28475	0.74	+0.1
1,943,218	-		BPHYT_RS28475	0.74	+0.5
1,943,408	+				+0.4
1,943,409	-				+0.8
1,943,563	+				+0.8
1,943,564	-				-1.5
1,944,465	-		BPHYT_RS28480	0.62	-1.3
1,944,598	-		BPHYT_RS28480	0.73	-0.8
1,945,065	-				-2.1
1,945,084	-				+1.8
1,945,401	-		BPHYT_RS28485	0.47	-1.6
1,945,805	+				+0.6
1,945,813	+				-1.9
1,945,865	-				-0.5
1,945,865	-				-0.7