Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24685

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
1,105,968	+		BPHYT_RS24675	0.58	-2.1
1,105,969	-		BPHYT_RS24675	0.58	-1.4
1,105,969	-		BPHYT_RS24675	0.58	-0.6
1,106,249	-		BPHYT_RS24675	0.84	-0.8
1,106,490	-		BPHYT_RS24680	0.19	+0.7
1,106,529	+		BPHYT_RS24680	0.33	+2.3
1,106,529	+		BPHYT_RS24680	0.33	-0.2
1,106,530	-		BPHYT_RS24680	0.34	+0.6
1,106,582	+		BPHYT_RS24680	0.53	+0.3
1,106,816	-				-0.9
1,107,040	+				-0.2
1,107,093	+		BPHYT_RS24685	0.15	-0.7
1,107,094	-		BPHYT_RS24685	0.16	-0.0
1,107,384	+		BPHYT_RS24685	0.48	+0.6
1,107,385	-		BPHYT_RS24685	0.48	+0.2
1,107,509	+		BPHYT_RS24685	0.62	+0.1
1,107,656	-		BPHYT_RS24685	0.78	+0.5
1,108,224	-		BPHYT_RS24690	0.30	-0.7
1,108,409	-		BPHYT_RS24690	0.47	-0.6
1,108,437	+		BPHYT_RS24690	0.49	-0.7
1,108,450	+		BPHYT_RS24690	0.51	-1.4
1,108,450	+		BPHYT_RS24690	0.51	-1.0
1,108,525	+		BPHYT_RS24690	0.57	-0.2
1,108,525	+		BPHYT_RS24690	0.57	-1.0
1,108,525	+		BPHYT_RS24690	0.57	-1.5
1,108,526	-		BPHYT_RS24690	0.58	-1.4
1,108,526	-		BPHYT_RS24690	0.58	-0.3