Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24435

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
1,047,583	+		BPHYT_RS24430	0.40	-1.6
1,047,583	+		BPHYT_RS24430	0.40	-0.4
1,047,584	-		BPHYT_RS24430	0.40	-0.5
1,047,590	+		BPHYT_RS24430	0.41	+1.7
1,047,591	-		BPHYT_RS24430	0.41	-0.2
1,047,732	-		BPHYT_RS24430	0.53	-1.1
1,047,860	+		BPHYT_RS24430	0.65	-1.6
1,048,116	-		BPHYT_RS24430	0.88	-0.3
1,048,147	+				+0.8
1,048,205	-				-0.9
1,048,458	+		BPHYT_RS24435	0.14	-0.7
1,048,459	-		BPHYT_RS24435	0.14	-0.8
1,048,499	-		BPHYT_RS24435	0.18	-0.9
1,048,691	+		BPHYT_RS24435	0.38	+0.3
1,048,691	+		BPHYT_RS24435	0.38	+1.0
1,048,691	+		BPHYT_RS24435	0.38	-1.2
1,048,692	-		BPHYT_RS24435	0.38	+0.4
1,048,697	+		BPHYT_RS24435	0.39	-0.2
1,048,716	+		BPHYT_RS24435	0.41	-0.7
1,048,774	+		BPHYT_RS24435	0.47	-0.4
1,048,938	+		BPHYT_RS24435	0.64	-0.7
1,049,450	-		BPHYT_RS24440	0.16	+2.2
1,049,807	+		BPHYT_RS24440	0.52	-0.8
1,050,054	-		BPHYT_RS24440	0.77	+1.8
1,050,054	-		BPHYT_RS24440	0.77	+0.2