Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16405

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
3,720,250	+				-0.4
3,720,347	+		BPHYT_RS16400	0.14	-0.3
3,720,348	-		BPHYT_RS16400	0.14	-1.1
3,720,501	+		BPHYT_RS16400	0.36	-0.9
3,720,501	+		BPHYT_RS16400	0.36	-0.2
3,720,501	+		BPHYT_RS16400	0.36	-0.6
3,720,502	-		BPHYT_RS16400	0.36	+0.8
3,720,502	-		BPHYT_RS16400	0.36	+0.1
3,720,575	+		BPHYT_RS16400	0.46	+0.2
3,720,575	+		BPHYT_RS16400	0.46	-0.6
3,720,575	+		BPHYT_RS16400	0.46	-0.5
3,720,575	+		BPHYT_RS16400	0.46	-2.2
3,720,604	+		BPHYT_RS16400	0.50	-1.1
3,720,605	-		BPHYT_RS16400	0.50	-0.5
3,720,674	-		BPHYT_RS16400	0.60	-0.4
3,720,863	-		BPHYT_RS16400	0.87	-2.8
3,720,926	+				+0.1
3,720,954	+				-1.9
3,720,960	+				+3.0
3,720,960	+				+2.2
3,720,961	-				-0.5
3,721,057	-				+0.2
3,721,077	-				+0.2
3,721,103	+				-0.9
3,721,103	+				-0.8
3,721,103	+				+0.3
3,721,103	+				-1.2
3,721,104	-				+0.6
3,721,104	-				+0.1
3,721,104	-				+0.2
3,721,104	-				-3.0
3,721,122	+				+1.1
3,721,123	-				-1.3
3,721,123	-				-1.8
3,721,361	+		BPHYT_RS16405	0.13	+0.2
3,721,412	+		BPHYT_RS16405	0.17	-0.6
3,721,412	+		BPHYT_RS16405	0.17	+1.8
3,721,412	+		BPHYT_RS16405	0.17	+1.2
3,721,412	+		BPHYT_RS16405	0.17	+0.4
3,721,413	-		BPHYT_RS16405	0.18	-0.1
3,721,413	-		BPHYT_RS16405	0.18	-0.1
3,721,413	-		BPHYT_RS16405	0.18	+1.8
3,721,413	-		BPHYT_RS16405	0.18	+2.4
3,721,413	-		BPHYT_RS16405	0.18	-0.1
3,721,428	-				-0.2
3,721,559	+		BPHYT_RS16405	0.30	+0.3
3,721,559	+		BPHYT_RS16405	0.30	+0.3
3,721,559	+		BPHYT_RS16405	0.30	-1.0
3,721,559	+		BPHYT_RS16405	0.30	-0.1
3,721,560	-		BPHYT_RS16405	0.30	+0.1
3,721,600	+		BPHYT_RS16405	0.34	+0.3
3,721,818	-		BPHYT_RS16405	0.53	+1.4
3,721,818	-		BPHYT_RS16405	0.53	-2.0
3,721,922	+		BPHYT_RS16405	0.62	-0.2
3,722,121	-		BPHYT_RS16405	0.79	+1.0
3,722,159	+		BPHYT_RS16405	0.83	+0.7
3,722,159	+		BPHYT_RS16405	0.83	+0.5
3,722,186	+		BPHYT_RS16405	0.85	+1.1
3,722,187	-		BPHYT_RS16405	0.85	-1.5
3,722,187	-		BPHYT_RS16405	0.85	+1.0
3,722,436	+				-0.2
3,722,437	-				-0.9
3,722,471	+				-0.1
3,722,471	+				-0.7
3,722,472	-				+0.8
3,722,472	-				-1.3
3,722,472	-				-1.4
3,722,668	+				+0.6
3,722,669	-				-1.0
3,722,841	+		BPHYT_RS16410	0.64	-0.1
3,722,841	+		BPHYT_RS16410	0.64	+0.4
3,722,841	+		BPHYT_RS16410	0.64	-0.6
3,722,841	+		BPHYT_RS16410	0.64	-1.4
3,722,842	-		BPHYT_RS16410	0.64	+0.7
3,722,842	-		BPHYT_RS16410	0.64	-1.3
3,722,842	-		BPHYT_RS16410	0.64	-0.7
3,722,842	-		BPHYT_RS16410	0.64	+3.6
3,722,842	-		BPHYT_RS16410	0.64	-0.4
3,722,845	+		BPHYT_RS16410	0.65	-0.4
3,722,846	-		BPHYT_RS16410	0.66	+0.3
3,722,846	-		BPHYT_RS16410	0.66	+0.1
3,722,846	-		BPHYT_RS16410	0.66	+2.0
3,722,846	-		BPHYT_RS16410	0.66	-0.0
3,722,846	-		BPHYT_RS16410	0.66	+0.2
3,722,846	-		BPHYT_RS16410	0.66	-0.9
3,722,948	-				-0.8
3,723,201	-				+0.8
3,723,204	-				-0.3
3,723,238	+				+0.4
3,723,239	-				+0.3
3,723,342	-				-1.4
3,723,353	+				+0.1
3,723,353	+				-1.5
3,723,353	+				-0.8
3,723,353	+				+2.0
3,723,353	+				-0.2
3,723,354	-				-0.8
3,723,354	-				+0.0
3,723,354	-				-0.1