Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14060

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
3,211,142	+		BPHYT_RS14055	0.44	+1.3
3,211,143	-		BPHYT_RS14055	0.44	-0.1
3,211,215	-		BPHYT_RS14055	0.52	+0.3
3,211,217	+		BPHYT_RS14055	0.52	+0.3
3,211,218	-		BPHYT_RS14055	0.52	-0.8
3,211,235	+		BPHYT_RS14055	0.54	+0.2
3,211,235	+		BPHYT_RS14055	0.54	-0.1
3,211,302	-		BPHYT_RS14055	0.61	+0.4
3,211,354	+		BPHYT_RS14055	0.67	-0.7
3,211,354	+		BPHYT_RS14055	0.67	-0.1
3,211,355	-		BPHYT_RS14055	0.67	+0.2
3,211,450	+		BPHYT_RS14055	0.77	-0.7
3,211,450	+		BPHYT_RS14055	0.77	+0.3
3,211,453	+		BPHYT_RS14055	0.78	-0.1
3,211,453	+				-0.9
3,211,453	+		BPHYT_RS14055	0.78	+0.9
3,211,454	-		BPHYT_RS14055	0.78	+0.4
3,211,454	-		BPHYT_RS14055	0.78	+0.0
3,211,454	-		BPHYT_RS14055	0.78	-1.6
3,211,454	-		BPHYT_RS14055	0.78	+0.3
3,211,456	+		BPHYT_RS14055	0.78	+0.2
3,211,457	-		BPHYT_RS14055	0.78	-0.1
3,211,490	+		BPHYT_RS14055	0.82	-0.9
3,211,532	+		BPHYT_RS14055	0.86	+0.5
3,211,532	+		BPHYT_RS14055	0.86	+0.2
3,211,532	+		BPHYT_RS14055	0.86	+0.2
3,211,533	-		BPHYT_RS14055	0.87	-0.0
3,211,533	-		BPHYT_RS14055	0.87	-0.9
3,211,533	-		BPHYT_RS14055	0.87	+0.1
3,211,533	-		BPHYT_RS14055	0.87	-0.4
3,211,533	-		BPHYT_RS14055	0.87	+1.8
3,211,634	-				+0.0
3,211,855	+				+0.9
3,212,017	+		BPHYT_RS14060	0.23	-0.7
3,212,270	+		BPHYT_RS14060	0.59	-0.4
3,212,386	-		BPHYT_RS14060	0.75	-0.4
3,212,515	-				-0.7
3,212,705	-				-0.6
3,212,757	-				-0.8
3,212,762	+				-0.1
3,212,763	-				-1.0
3,212,876	+		BPHYT_RS14065	0.31	+0.9
3,212,951	+		BPHYT_RS14065	0.54	+0.2
3,212,951	+		BPHYT_RS14065	0.54	-0.1
3,212,952	-		BPHYT_RS14065	0.54	-0.5
3,212,952	-		BPHYT_RS14065	0.54	-1.6
3,212,981	+		BPHYT_RS14065	0.63	-1.1
3,212,981	+		BPHYT_RS14065	0.63	-0.6
3,213,132	-				-0.4
3,213,256	-				+0.1
3,213,256	-				+1.6
3,213,425	-				-0.6
3,213,427	-				+0.3
3,213,560	+				-1.1
3,213,560	+				+1.0
3,213,561	-				-1.0