Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13820

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
3,150,106	+				-0.9
3,150,111	-				+0.2
3,150,137	+				-0.7
3,150,225	+				-0.9
3,150,225	+				-1.3
3,150,225	+				+1.0
3,150,459	+				-1.7
3,150,753	+				+0.4
3,150,754	-				+0.0
3,150,867	-		BPHYT_RS13815	0.29	+1.9
3,150,924	-		BPHYT_RS13815	0.52	-1.4
3,150,953	-		BPHYT_RS13815	0.64	-2.0
3,150,953	-		BPHYT_RS13815	0.64	-0.9
3,151,037	+				-0.0
3,151,038	-				+1.9
3,151,225	-				+0.2
3,151,515	-		BPHYT_RS13820	0.25	+0.9
3,152,091	-		BPHYT_RS13820	0.60	-1.4
3,152,348	-		BPHYT_RS13820	0.75	-1.2
3,152,348	-		BPHYT_RS13820	0.75	+0.6
3,152,386	-		BPHYT_RS13820	0.77	+0.0
3,152,528	-		BPHYT_RS13820	0.86	-0.3
3,152,559	-		BPHYT_RS13820	0.88	-0.5
3,152,718	+				+0.3
3,152,763	-				+0.3
3,152,781	+				+0.3
3,152,819	-				-0.8
3,152,819	-				-2.1
3,152,985	+				+0.5
3,152,985	+				-0.7
3,152,987	+				+0.3
3,153,014	+				-0.4
3,153,015	-				-1.4
3,153,015	-				-0.0
3,153,015	-				-1.7
3,153,016	+				-0.7
3,153,016	+				-0.1
3,153,017	-				-0.1
3,153,042	-				+0.7
3,153,119	+				-0.3
3,153,120	-				-0.7
3,153,194	+				+0.8
3,153,195	-				+0.4
3,153,297	-				+0.5
3,153,297	-				-0.3
3,153,301	+				-0.2
3,153,405	-				-0.4
3,153,540	-		BPHYT_RS13825	0.19	-2.4
3,153,583	+				+2.2
3,153,583	+		BPHYT_RS13825	0.22	+1.5