Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12235

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
2,792,974	-		BPHYT_RS12225	0.66	-2.3
2,793,321	+				+0.8
2,793,322	-				+0.0
2,793,604	+		BPHYT_RS12230	0.21	+1.2
2,793,693	+		BPHYT_RS12230	0.53	+0.4
2,793,873	+				-0.2
2,793,894	-				+0.8
2,793,898	+				-0.3
2,793,898	+				+0.5
2,793,915	+				-0.4
2,793,915	+				+0.7
2,793,970	-				+0.6
2,793,970	-				+0.5
2,793,970	-				+0.3
2,794,028	+				+1.8
2,794,028	+				-1.7
2,794,603	-		BPHYT_RS12235	0.46	-0.5
2,794,630	-		BPHYT_RS12235	0.48	-0.6
2,794,987	+		BPHYT_RS12235	0.74	-3.3
2,794,989	+		BPHYT_RS12235	0.74	-0.6
2,794,990	-		BPHYT_RS12235	0.74	-0.2
2,794,990	-		BPHYT_RS12235	0.74	-0.0
2,794,990	-		BPHYT_RS12235	0.74	+0.4
2,795,323	-				+0.1
2,795,436	+				+1.5
2,795,437	-				-0.3