Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12175

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
2,777,414	-				-0.7
2,781,075	+				-2.4
2,781,075	+				+1.1
2,781,076	-				+0.1
2,781,076	-				-1.2
2,781,368	+		BPHYT_RS12180	0.30	+0.1
2,781,368	+		BPHYT_RS12180	0.30	-0.4
2,781,368	+		BPHYT_RS12180	0.30	-0.1
2,781,368	+		BPHYT_RS12180	0.30	-1.3
2,781,369	-		BPHYT_RS12180	0.30	+2.1
2,781,369	-		BPHYT_RS12180	0.30	-0.3
2,781,369	-		BPHYT_RS12180	0.30	+1.5
2,781,369	-		BPHYT_RS12180	0.30	-0.7
2,781,369	-		BPHYT_RS12180	0.30	-0.9
2,781,369	-		BPHYT_RS12180	0.30	+0.7
2,781,766	+		BPHYT_RS12180	0.70	-0.7
2,781,767	-		BPHYT_RS12180	0.70	-1.1
2,781,813	+		BPHYT_RS12180	0.74	+0.4
2,781,813	+		BPHYT_RS12180	0.74	+0.5
2,781,814	-		BPHYT_RS12180	0.74	-0.7