Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11540

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
2,623,422	+		BPHYT_RS11535	0.63	-1.1
2,623,753	-				+0.8
2,623,860	+				+1.2
2,623,861	-				+0.7
2,623,985	-				-0.6
2,624,020	-				-0.8
2,624,080	+				-1.3
2,624,081	-				+0.1
2,624,127	+				-1.8
2,624,129	+				-0.1
2,624,130	-				-0.3
2,624,130	-				-1.1
2,624,130	-				+0.3
2,624,212	+				-0.1
2,624,363	+		BPHYT_RS11540	0.13	+0.4
2,624,400	-		BPHYT_RS11540	0.20	+1.9
2,624,539	+		BPHYT_RS11540	0.47	+0.3
2,624,540	-		BPHYT_RS11540	0.47	+0.3
2,625,315	+		BPHYT_RS11545	0.50	-1.0
2,625,316	-		BPHYT_RS11545	0.50	-0.8
2,625,316	-		BPHYT_RS11545	0.50	-0.3
2,625,349	-		BPHYT_RS11545	0.53	-0.8
2,625,373	-		BPHYT_RS11545	0.56	-0.9
2,625,655	-		BPHYT_RS11545	0.84	+0.7