Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11520

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
2,619,083	-				-0.0
2,619,086	+				-0.9
2,619,087	-				+0.4
2,619,254	+		BPHYT_RS11515	0.21	-1.0
2,619,255	-		BPHYT_RS11515	0.21	-0.0
2,619,664	+		BPHYT_RS11515	0.65	-0.7
2,619,664	+		BPHYT_RS11515	0.65	-0.3
2,619,770	+		BPHYT_RS11515	0.77	+1.0
2,619,771	-		BPHYT_RS11515	0.77	+1.9
2,619,825	-		BPHYT_RS11515	0.82	+0.1
2,619,825	-		BPHYT_RS11515	0.82	+1.0
2,619,890	+		BPHYT_RS11515	0.89	+0.8
2,619,891	-		BPHYT_RS11515	0.89	-0.7
2,620,159	+				+0.7
2,620,161	+				-0.0
2,620,162	-				-1.4
2,620,607	+		BPHYT_RS11520	0.40	+1.5
2,620,608	-		BPHYT_RS11520	0.40	-0.7
2,620,676	-		BPHYT_RS11520	0.45	-0.7
2,621,014	-		BPHYT_RS11520	0.69	-1.0
2,621,018	-		BPHYT_RS11520	0.70	-0.5
2,621,019	+		BPHYT_RS11520	0.70	-0.1
2,621,019	+		BPHYT_RS11520	0.70	-0.7
2,621,019	+		BPHYT_RS11520	0.70	+0.6
2,621,019	+		BPHYT_RS11520	0.70	-1.2
2,621,019	+		BPHYT_RS11520	0.70	+0.7
2,621,020	-		BPHYT_RS11520	0.70	+0.9
2,621,020	-		BPHYT_RS11520	0.70	-0.4
2,621,020	-		BPHYT_RS11520	0.70	-0.4
2,621,020	-		BPHYT_RS11520	0.70	+0.3
2,621,193	+		BPHYT_RS11520	0.82	+2.9
2,621,193	+		BPHYT_RS11520	0.82	+1.1
2,621,319	+				-1.2
2,621,320	-				-1.1
2,621,621	-				+1.0
2,621,639	+				-0.7
2,621,689	+				+0.2
2,621,689	+				+0.9
2,621,689	+				+0.1
2,621,741	-				+0.3
2,621,799	+				-0.3
2,621,799	+				+0.6
2,621,800	-				+1.6
2,621,844	-				-0.8
2,621,885	-				+3.1
2,621,925	-				-0.9
2,622,274	+		BPHYT_RS11530	0.84	-1.8
2,622,282	-		BPHYT_RS11530	0.86	-0.2
2,622,307	+				+0.5
2,622,308	-				+0.4