Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09890

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
2,249,794	-		BPHYT_RS09885	0.32	-0.2
2,249,986	+		BPHYT_RS09885	0.48	-0.4
2,250,309	+		BPHYT_RS09885	0.74	-0.4
2,250,700	+				-1.0
2,250,850	+				+0.2
2,250,851	-				-0.3
2,250,851	-				+0.3
2,250,881	-		BPHYT_RS09890	0.11	-0.3
2,250,974	-		BPHYT_RS09890	0.17	-1.8
2,251,592	-		BPHYT_RS09890	0.54	-0.8
2,252,107	+		BPHYT_RS09890	0.85	-1.0
2,252,242	-				+0.6
2,252,728	+		BPHYT_RS09895	0.37	-1.8