Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08275

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
1,889,280	+		BPHYT_RS08270	0.59	+1.1
1,889,603	-		BPHYT_RS08270	0.76	+0.3
1,889,604	+		BPHYT_RS08270	0.76	+0.6
1,889,677	+		BPHYT_RS08270	0.81	-0.1
1,889,678	-		BPHYT_RS08270	0.81	+0.3
1,889,733	+		BPHYT_RS08270	0.84	-0.1
1,889,772	+		BPHYT_RS08270	0.86	+0.7
1,889,772	+		BPHYT_RS08270	0.86	-0.7
1,889,773	-		BPHYT_RS08270	0.86	-0.2
1,890,341	+		BPHYT_RS08275	0.14	+0.1
1,890,400	-		BPHYT_RS08275	0.18	+0.1
1,890,400	-		BPHYT_RS08275	0.18	-0.0
1,890,590	+		BPHYT_RS08275	0.33	-0.4
1,890,590	+		BPHYT_RS08275	0.33	-0.1
1,890,591	-		BPHYT_RS08275	0.33	-0.4
1,890,591	-		BPHYT_RS08275	0.33	-0.0
1,890,591	-		BPHYT_RS08275	0.33	-1.1
1,890,856	-		BPHYT_RS08275	0.53	+1.1
1,891,200	+		BPHYT_RS08275	0.80	+0.8
1,891,201	-		BPHYT_RS08275	0.80	-0.5
1,891,324	-		BPHYT_RS08275	0.89	-0.8
1,891,498	-				-0.4
1,892,289	+		BPHYT_RS08280	0.70	+0.7
1,892,405	+		BPHYT_RS08280	0.83	+1.2
1,892,405	+		BPHYT_RS08280	0.83	+0.8
1,892,455	-		BPHYT_RS08280	0.88	-0.6