Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07625

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
1,734,843	-		BPHYT_RS07620	0.62	+1.0
1,734,941	-		BPHYT_RS07620	0.70	+0.1
1,735,003	+		BPHYT_RS07620	0.74	+1.4
1,735,286	+				-1.4
1,735,341	-				+1.1
1,735,542	+				+0.4
1,735,543	-				-0.4
1,735,567	+				-0.1
1,735,996	+		BPHYT_RS07625	0.24	-0.2
1,735,997	-		BPHYT_RS07625	0.24	+1.6
1,736,167	+		BPHYT_RS07625	0.39	+1.2
1,736,168	-		BPHYT_RS07625	0.39	+0.2
1,736,168	-		BPHYT_RS07625	0.39	+0.9
1,736,389	+		BPHYT_RS07625	0.59	-0.4
1,736,431	+		BPHYT_RS07625	0.63	-2.1
1,736,450	-		BPHYT_RS07625	0.64	+0.4
1,736,506	+		BPHYT_RS07625	0.69	+1.0
1,736,555	-		BPHYT_RS07625	0.74	-2.6
1,736,566	+		BPHYT_RS07625	0.75	+0.1
1,736,567	-		BPHYT_RS07625	0.75	+0.3
1,736,928	+				-0.4
1,737,330	+		BPHYT_RS07630	0.40	+0.3
1,737,352	+		BPHYT_RS07630	0.42	-1.3
1,737,353	-		BPHYT_RS07630	0.42	-0.7
1,737,355	-		BPHYT_RS07630	0.42	-2.2
1,737,554	-		BPHYT_RS07630	0.62	+0.3
1,737,748	-		BPHYT_RS07630	0.82	-1.8