Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04920

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
1,129,458	+				+0.3
1,129,458	+				+0.2
1,129,459	-				-0.1
1,129,459	-				-2.1
1,129,499	+				-0.2
1,129,499	+				-2.3
1,129,572	+				-0.5
1,129,572	+				-0.4
1,129,693	+		BPHYT_RS04915	0.11	+0.6
1,129,836	+		BPHYT_RS04915	0.34	-0.7
1,129,837	-		BPHYT_RS04915	0.34	-1.0
1,129,918	-		BPHYT_RS04915	0.46	-0.4
1,129,954	-		BPHYT_RS04915	0.52	+0.3
1,130,116	+		BPHYT_RS04915	0.77	-1.9
1,130,137	+		BPHYT_RS04915	0.81	-1.9
1,130,137	+		BPHYT_RS04915	0.81	-1.1
1,130,138	-		BPHYT_RS04915	0.81	+1.9
1,130,138	-		BPHYT_RS04915	0.81	-0.3
1,130,314	+				-1.5
1,130,315	-				-0.2
1,130,315	-				-0.4
1,130,363	+				+0.3
1,130,419	-				-0.4
1,130,666	+		BPHYT_RS04920	0.55	-0.5
1,130,667	-		BPHYT_RS04920	0.56	-2.6
1,130,775	-		BPHYT_RS04920	0.83	-1.0
1,131,818	-				-0.1