Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS00585

Experiment: 24hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO7 MOI 1
141,227	+		BPHYT_RS00580	0.11	+0.8
141,304	+		BPHYT_RS00580	0.29	+1.4
141,304	+		BPHYT_RS00580	0.29	-0.3
141,305	-		BPHYT_RS00580	0.29	-0.7
141,350	+		BPHYT_RS00580	0.39	-0.6
141,362	+		BPHYT_RS00580	0.42	-1.4
141,362	+		BPHYT_RS00580	0.42	+1.2
141,517	-		BPHYT_RS00580	0.77	+0.7
141,651	+				+0.4
141,723	-				+0.7
141,937	+				-0.0
141,948	+				+0.7
142,089	-				-0.2
142,134	+				-0.4
142,135	-				-3.0
142,136	+				-0.1
142,137	-				-0.5
142,137	-				-0.4
142,137	-				-0.3
142,189	-				-0.2
142,248	-		BPHYT_RS00585	0.27	-2.9
142,357	-		BPHYT_RS00585	0.77	-0.9
142,390	-				+0.0
142,390	-				-0.8
142,424	-				+0.3
142,443	-				+0.9
142,673	+				+1.9
142,763	+				-0.5
142,771	-				+0.5
142,802	-				-0.4
142,802	-				+0.1
142,947	+				-0.6
142,947	+				-2.3
142,948	-				-0.3
142,948	-				-1.0
142,953	+				+0.9
142,953	+				+0.7
142,954	-				-0.5
143,171	+		BPHYT_RS00590	0.30	-0.8
143,303	+		BPHYT_RS00590	0.54	+0.8
143,303	+		BPHYT_RS00590	0.54	+0.6
143,304	-		BPHYT_RS00590	0.55	+0.3
143,304	-		BPHYT_RS00590	0.55	+0.2
143,305	+		BPHYT_RS00590	0.55	-0.8
143,345	-		BPHYT_RS00590	0.62	+0.3